Interactively rotate a tree object — click_rotate • dendextend

Lets te user click a plot of dendrogram and rotates the tree based on the location of the click.

Code for mouse selection of (sub-)cluster to be rotated

click_rotate(x, ...)

# Default S3 method
click_rotate(x, ...)

# S3 method for class 'dendrogram'
click_rotate(
  x,
  plot = TRUE,
  plot_after = plot,
  horiz = FALSE,
  continue = FALSE,
  ...
)

Arguments

x: a tree object (either a dendrogram or hclust)
...: parameters passed to the plot
plot: (logical) should the dendrogram first be plotted.
plot_after: (logical) should the dendrogram be plotted after the rotation?
horiz: logical. Should the plot be normal or horizontal?
continue: logical. If TRUE, allows the user to keep clicking the plot until a click is made on the labels.

Value

A rotated tree object

See also

rotate.dendrogram

Author

Andrej-Nikolai Spiess, Tal Galili

Examples

# create the dend:
dend <- USArrests %>%
  dist() %>%
  hclust("ave") %>%
  as.dendrogram() %>%
  color_labels()
if (FALSE) { # \dontrun{
# play with the rotation once
dend <- click_rotate(dend)
dend <- click_rotate(dend, horiz = TRUE)
# keep playing with the rotation:
while (TRUE) dend <- click_rotate(dend)
# the same as
dend <- click_rotate(dend, continue = TRUE)
} # }